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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793191.1_cds_XP_016432406.1_2792
CDS Infomation

[gene=LOC107759049] [db_xref=GeneID:107759049] [protein=probable methionine--tRNA ligase] [protein_id=XP_016432406.1] [location=complement(join(1471..1575,2225..2288,2909..3000,3472..3540,3665..3755,3911..4059,4446..4562,5042..5107,6653..6718,7294..7464,7553..7618,7724..7798))] [gbkey=CDS]
Sequence

ATGGCATCTGCAGATCACAAGCAAAACATTGTTTCAGCTCTAAGCAAGCACCTCTCAACC
CTGTCATTAGACCCAAATTCGGATAAGGACATTAAAAGCTTGTGTACAGAAATTTTAAAT
TCTTCCCAAAAAGATAATGAGTTAGTGAAATGGGTGGAGTTTGCCAATAACTTCCCTGTT
GATTCTGGGGCAAGCTTTAAAGCTCTAGGTGAGTTGAATGAGGATTTGAGTAAAAAGTCT
GTTATTTTGGGCAATGGCCTCAAGATTTCAGCAGCTGATATCATTGTCTTTGCATCCGTG
CATGCATCCGTGATCAGTCTTTCAAACTCTGATAGAAACAAATTGCCGCACTTGCTTAGA
TGGATGGACTATATCCAGATTAAAGGTGATGTCGGAGATAAATTCCAAACTATTTTGCTG
GAGAAGGTCCAATTTGAGCCACCTGCATCAAAAAGTGTGAAGAAGGTGGAAGTGGAGTCA
AATATAAAAAAAACTGAGTCAGAGACCAAAAGGGCTAGTAGCTCAGATGCAGACTCAAAA
ACAAAGAACAGTCGTGGTGCAAAGAAAGCTGCTGCAGATAATCAAACTTCTGTTGAAAAG
AAGAAGTTGCCTGAAAAGGTAGATGAGAAAGATAAAGATATCAGTGTTAGTCTGCTCAAA
TTACAGATTGGCCACATTAAAAAAGCATGGAAACATCCATCAGCTGATAGCTTACTGGTT
GAGGAGATAGATGTTGGAGAAGCAAAATGTCGTCAAGTGGTTAGCGGCCTGGCAAAGTTT
TGCAGTCCGGAGCAGTTGACTAATCGCCTTGTGGTACTCGTGACAAACATGAAACCATCG
AAACTAAGGGATGTAGCATCAGAGGGAATGGTATTATGTGCTTCTAATGAAGATCATACT
GTGGTGGAGCCTTTGATAGCACCAGAAGGTGCCAAAGTTGGGGAATGCATCTTATTTTCT
GGGCATGATGGGAAACCAGAAGATGTTCTGAACCCCAAAAAGAAACAATTTGATAAAATT
GCCGTGAACCTTTTCACTGATGATAAAGGAATTGCCACATTCAAAGGAATCCCATTCATG
ACATCTGCTGGACCATGCACGTCTTCAATTCCTCGAGCAAGCATCAAGTGA

Peptide Sequence

PEP ID

XP_016432406.1
PEP Infomation

PREDICTED: probable methionine--tRNA ligase [Nicotiana tabacum]
Sequence

MASADHKQNIVSALSKHLSTLSLDPNSDKDIKSLCTEILNSSQKDNELVKWVEFANNFPV
DSGASFKALGELNEDLSKKSVILGNGLKISAADIIVFASVHASVISLSNSDRNKLPHLLR
WMDYIQIKGDVGDKFQTILLEKVQFEPPASKSVKKVEVESNIKKTESETKRASSSDADSK
TKNSRGAKKAAADNQTSVEKKKLPEKVDEKDKDISVSLLKLQIGHIKKAWKHPSADSLLV
EEIDVGEAKCRQVVSGLAKFCSPEQLTNRLVVLVTNMKPSKLRDVASEGMVLCASNEDHT
VVEPLIAPEGAKVGECILFSGHDGKPEDVLNPKKKQFDKIAVNLFTDDKGIATFKGIPFM
TSAGPCTSSIPRASIK

Transcript Sequence

Gene sequence data has not been registered.